BiologyNEB 2076 (old course)
Describe the structure of DNA. How is DNA replicated?
5Answer
Structure of DNA
DNA (Deoxyribonucleic Acid) is a double-stranded helical molecule that carries genetic information. Its structure consists of three main components:
- Phosphate Group: Forms the backbone of the DNA strand, providing structural stability.
- Deoxyribose Sugar: A five-carbon sugar that links phosphate groups via phosphodiester bonds, forming the sugar-phosphate backbone.
- Nitrogenous Bases: Four types of bases are attached to the sugar:
- Purines: Adenine (A) and Guanine (G) (double-ring structure).
- Pyrimidines: Thymine (T) and Cytosine (C) (single-ring structure). The two strands are held together by hydrogen bonds between complementary bases:
- Adenine (A) pairs with Thymine (T) via two hydrogen bonds.
- Cytosine (C) pairs with Guanine (G) via three hydrogen bonds. The strands run antiparallel (one 5' → 3' and the other 3' → 5').
The double-helix structure was proposed by James Watson and Francis Crick (1953), based on X-ray crystallography data by Rosalind Franklin.
DNA Replication
DNA replication is a semi-conservative process where each original strand serves as a template for a new complementary strand, resulting in two identical DNA molecules. It occurs during the S-phase of the cell cycle and involves three main steps:
1. Initiation
- Helicase unwinds the DNA double helix, breaking hydrogen bonds between bases, forming a replication fork.
- Single-Strand Binding Proteins (SSBs) stabilize the unwound strands.
- Topoisomerase relieves supercoiling ahead of the replication fork.
2. Elongation
- DNA Polymerase III synthesizes new DNA strands in the 5' → 3' direction (only).
- On the leading strand, synthesis is continuous.
- On the lagging strand, synthesis is discontinuous, forming Okazaki fragments (short DNA segments).
- Primase lays down a short RNA primer to initiate DNA synthesis.
- DNA Polymerase I removes RNA primers and fills gaps with DNA nucleotides.
- Ligase seals the gaps between Okazaki fragments via phosphodiester bonds.
3. Termination
- In prokaryotes, replication ends at specific termination sites.
- In eukaryotes, multiple replication forks work simultaneously, and telomerase extends telomeres to prevent chromosome shortening.
Key Enzymes Involved:
| Enzyme | Function |
|---|---|
| Helicase | Unwinds DNA double helix |
| DNA Polymerase III | Synthesizes new DNA strands (main enzyme) |
| Primase | Synthesizes RNA primers |
| DNA Polymerase I | Removes RNA primers and fills gaps |
| Ligase | Joins Okazaki fragments via phosphodiester bonds |
| Topoisomerase | Relieves supercoiling ahead of replication fork |
DNA replication ensures genetic fidelity with high accuracy, though errors (mutations) may occur and are corrected by proofreading mechanisms of DNA polymerase.
Discussion
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